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Making the most of drought and salinity transcriptomics

Deyholos, Michael K.

Plant, Cell & Environment, April 2010, Vol.33(4), pp.648-654 [Peer Reviewed Journal]

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Pectinmethylesterases (PME) and Pectinmethylesterase Inhibitors (PMEI) Enriched during Phloem Fiber Development in Flax ( Linum usitatissimum ) (Pectinmethylesterases and Flax Fiber Development)

Pinzon-Latorre, David ; Deyholos, Michael K Fang, David D. (Editor)

2014, Vol.9(8), p.e105386 [Peer Reviewed Journal]

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Chitinase-Like ( CTL ) and Cellulose Synthase ( CESA ) Gene Expression in Gelatinous-Type Cellulosic Walls of Flax ( Linum usitatissimum L.) Bast Fibers

Mokshina, Natalia ; Gorshkova, Tatyana ; Deyholos, Michael K Zabotina, Olga A. (editor)

PLoS ONE, 2014, Vol.9(6) [Peer Reviewed Journal]

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Differential expression of miRNAs in Brassica napus root following infection with Plasmodiophora brassicae

Verma, Shiv S ; Rahman, Muhammad H ; Deyholos, Michael K ; Basu, Urmila ; Kav, Nat N V

PloS one, 2014, Vol.9(1), pp.e86648 [Peer Reviewed Journal]

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5
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Exploration of inhibitors for diaminopimelate aminotransferase

Fan, Chenguang ; Clay, Matthew D ; Deyholos, Michael K ; Vederas, John C

Bioorganic & Medicinal Chemistry, 2010, Vol.18(6), pp.2141-2151 [Peer Reviewed Journal]

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6
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RNASeq Analysis of the Shoot Apex of Flax (Linum usitatissimum) to Identify Phloem Fiber Specification Genes

Zhang, Ningyu ; Deyholos, Michael K

Frontiers in plant science, 2016, Vol.7, pp.950 [Peer Reviewed Journal]

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7
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Genomic and expression analysis of the flax (Linum usitatissimum) family of glycosyl hydrolase 35 genes

Hobson, Neil ; Deyholos, Michael K

BMC genomics, 23 May 2013, Vol.14, pp.344 [Peer Reviewed Journal]

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8
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Engineering bast fiber feedstocks for use in composite materials

Deyholos, Michael K ; Potter, Simon

Biocatalysis and Agricultural Biotechnology, January 2014, Vol.3(1), pp.53-57 [Peer Reviewed Journal]

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9
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Ecological implications of single and mixed nitrogen nutrition in Arabidopsis thaliana

Mcnickle, Gordon G ; Deyholos, Michael K ; Cahill, James F

BMC ecology, 23 July 2013, Vol.13, pp.28 [Peer Reviewed Journal]

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10
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RNA-seq Transcriptome Response of Flax ( Linum usitatissimum L.) to the Pathogenic Fungus Fusarium oxysporum f. sp. lini

Galindo-González, Leonardo ; Deyholos, Michael K

Frontiers in Plant Science, 2016, Vol.7 [Peer Reviewed Journal]

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11
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Effects of plant growth regulator treatments on stem vascular tissue development in linseed ( Linum usitatissimum L.)

Mckenzie, Ryan R ; Deyholos, Michael K

Industrial Crops & Products, 2011, Vol.34(1), pp.1119-1127 [Peer Reviewed Journal]

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12
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Identification, characterization and distribution of transposable elements in the flax (Linum usitatissimum L.) genome

González, Leonardo Galindo ; Deyholos, Michael K

BMC genomics, 21 November 2012, Vol.13, pp.644 [Peer Reviewed Journal]

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13
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Characterization and transcript profiling of the pectin methylesterase (PME) and pectin methylesterase inhibitor (PMEI) gene families in flax (Linum usitatissimum)

Pinzón-Latorre, David ; Deyholos, Michael K

BMC genomics, 30 October 2013, Vol.14, pp.742 [Peer Reviewed Journal]

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14
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Identification, characterization and distribution of transposable elements in the flax (Linum usitatissimum L.) genome

González Leonardo Galindo ; Deyholos Michael K

BMC Genomics, 01 November 2012, Vol.13(1), p.644 [Peer Reviewed Journal]

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15
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RNA-seq Transcriptome Response of Flax ( L.) to the Pathogenic Fungus f. sp.

Galindo-González, Leonardo ; Deyholos, Michael K

Frontiers in plant science, 2016, Vol.7, pp.1766 [Peer Reviewed Journal]

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16
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Nutrient foraging behaviour of four co‐occurring perennial grassland plant species alone does not predict behaviour with neighbours

Mcnickle, Gordon G. ; Deyholos, Michael K. ; Cahill, James F.

Functional Ecology, March 2016, Vol.30(3), pp.420-430 [Peer Reviewed Journal]

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17
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Identification and functional analysis of mitogen-activated protein kinase kinase kinase (MAPKKK) genes in canola ( Brassica napus L.)

Sun, Yun ; Wang, Chen ; Yang, Bo ; Wu, Feifei ; Hao, Xueyu ; Liang, Wanwan ; Niu, Fangfang ; Yan, Jingli ; Zhang, Hanfeng ; Wang, Boya ; Deyholos, Michael K ; Jiang, Yuan - Qing

Journal Of Experimental Botany, 2014, Vol. 65(8), pp.2171-2188 [Peer Reviewed Journal]

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18
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Chromosome‐scale pseudomolecules refined by optical, physical and genetic maps in flax

You, Frank M. ; Xiao, Jin ; Li, Pingchuan ; Yao, Zhen ; Jia, Gaofeng ; He, Liqiang ; Zhu, Tingting ; Luo, Ming‐Cheng ; Wang, Xiue ; Deyholos, Michael K. ; Cloutier, Sylvie

Plant Journal, July 2018, Vol.95(2), pp.371-384 [Peer Reviewed Journal]

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19
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Ty1-copia elements reveal diverse insertion sites linked to polymorphisms among flax (Linum usitatissimum L.) accessions

Galindo-Gonzalez, Leonardo ; Mhiri, Corinne ; Grandbastien, Marie-Angele ; Deyholos, Michael K Prodinra, Archive Ouverte (Editor)

BMC Genomics, 2016, Vol.17, pp.1-18 [Peer Reviewed Journal]

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20
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LTR-retrotransposons in plants: Engines of evolution

Galindo-González, Leonardo ; Mhiri, Corinne ; Deyholos, Michael K ; Grandbastien, Marie-Angèle

Gene, 30 August 2017, Vol.626, pp.14-25 [Peer Reviewed Journal]

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21
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Ion Torrent sequencing as a tool for mutation discovery in the flax (Linum usitatissimum L.) genome

Galindo-González, Leonardo ; Pinzón-Latorre, David ; Bergen, Erik A ; Jensen, Dustin C ; Deyholos, Michael K

Plant methods, 2015, Vol.11, pp.19 [Peer Reviewed Journal]

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22
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Development of Microsatellite Markers Derived from Expressed Sequence Tags of Polyporales for Genetic Diversity Analysis of Endangered Polyporus umbellatus

Zhang, Yuejin ; Chen, Yuanyuan ; Wang, Ruihong ; Zeng, Ailin ; Deyholos, Michael K ; Shu, Jia ; Guo, Hongbo

BioMed research international, 2015, Vol.2015, pp.941357 [Peer Reviewed Journal]

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23
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Over-expression of a novel JAZ family gene from Glycine soja, increases salt and alkali stress tolerance

Zhu, Dan ; Cai, Hua ; Luo, Xiao ; Bai, Xi ; Deyholos, Michael K ; Chen, Qin ; Chen, Chao ; Ji, Wei ; Zhu, Yanming

Biochemical and Biophysical Research Communications, 21 September 2012, Vol.426(2), pp.273-279 [Peer Reviewed Journal]

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24
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A Plant-Produced Bacteriophage Tailspike Protein for the Control of Salmonella

Miletic, Sean ; Simpson, David J ; Szymanski, Christine M ; Deyholos, Michael K ; Menassa, Rima

Frontiers in plant science, 2015, Vol.6, pp.1221 [Peer Reviewed Journal]

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25
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Evaluating Methods for Isolating Total RNA and Predicting the Success of Sequencing Phylogenetically Diverse Plant Transcriptomes (Plant RNA Isolation and Transcriptome Sequencing)

Johnson, Marc T. J ; Carpenter, Eric J ; Tian, Zhijian ; Bruskiewich, Richard ; Burris, Jason N ; Carrigan, Charlotte T ; Chase, Mark W ; Clarke, Neil D ; Covshoff, Sarah ; dePamphilis, Claude W ; Edger, Patrick P ; Goh, Falicia ; Graham, Sean ; Greiner, Stephan ; Hibberd, Julian M ; Jordon-Thaden, Ingrid ; Kutchan, Toni M ; Leebens-Mack, James ; Melkonian, Michael ; Miles, Nicholas ; Myburg, Henrietta ; Patterson, Jordan ; Pires, J. Chris ; Ralph, Paula ; Rolf, Megan ; Sage, Rowan F ; Soltis, Douglas ; Soltis, Pamela ; Stevenson, Dennis ; Stewart, C. Neal ; Surek, Barbara ; Thomsen, Christina J. M ; Villarreal, Juan Carlos ; Wu, Xiaolei ; Zhang, Yong ; Deyholos, Michael K ; Wong, Gane Ka-Shu Quince, Christopher (Editor)

2012, Vol.7(11), p.e50226 [Peer Reviewed Journal]

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26
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Elucidating steroid alkaloid biosynthesis in Veratrum californicum: production of verazine in Sf9 cells

Augustin, Megan M. ; Ruzicka, Dan R. ; Shukla, Ashutosh K. ; Augustin, Jörg M. ; Starks, Courtney M. ; O' Neil‐Johnson, Mark ; Mckain, Michael R. ; Evans, Bradley S. ; Barrett, Matt D. ; Smithson, Ann ; Wong, Gane Ka‐Shu ; Deyholos, Michael K. ; Edger, Patrick P. ; Pires, J. Chris ; Leebens‐Mack, James H. ; Mann, David A. ; Kutchan, Toni M.

Plant Journal, June 2015, Vol.82(6), pp.991-1003 [Peer Reviewed Journal]

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27
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The genome of flax ( Linum usitatissimum ) assembled de novo from short shotgun sequence reads

Wang, Zhiwen ; Hobson, Neil ; Galindo, Leonardo ; Zhu, Shilin ; Shi, Daihu ; Mcdill, Joshua ; Yang, Linfeng ; Hawkins, Simon ; Neutelings, Godfrey ; Datla, Raju ; Lambert, Georgina ; Galbraith, David W. ; Grassa, Christopher J. ; Geraldes, Armando ; Cronk, Quentin C. ; Cullis, Christopher ; Dash, Prasanta K. ; Kumar, Polumetla A. ; Cloutier, Sylvie ; Sharpe, Andrew G. ; Wong, Gane K. ‐S. ; Wang, Jun ; Deyholos, Michael K.

Plant Journal, November 2012, Vol.72(3), pp.461-473 [Peer Reviewed Journal]

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28
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Optimal fertilizer application for Panax notoginseng and effect of soil water on root rot disease and saponin contents

Xia, Pengguo ; Guo, Hongbo ; Zhao, Hongguang ; Jiao, Jie ; Deyholos, Michael K ; Yan, Xijun ; Liu, Yan ; Liang, Zongsuo

Journal of Ginseng Research, January 2016, Vol.40(1), pp.38-46 [Peer Reviewed Journal]

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29
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Wild Panax vietnamensis and Panax stipuleanatus markedly increase the genetic diversity of Panax notoginseng (Araliaceae) revealed by start codon targeted (SCoT) markers and ITS DNA barcode

Xia, Pengguo ; Guo, Hongbo ; Zhang, Yu ; Deyholos, Michael K ; Peng, Liang ; Jia, Yanyan ; Yan, Xijun ; Liu, Yan ; Liang, Zongsuo

Biochemical Systematics and Ecology, June 2016, Vol.66, pp.37-42 [Peer Reviewed Journal]

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30
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Development of Microsatellite Markers Derived from Expressed Sequence Tags of Polyporales for Genetic Diversity Analysis of Endangered

Zhang, Yuejin ; Chen, Yuanyuan ; Wang, Ruihong ; Zeng, Ailin ; Deyholos, Michael K ; Shu, Jia ; Guo, Hongbo Dondero, Francesco

BioMed Research International, 2015, Vol.2015, 11 pages [Peer Reviewed Journal]

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31
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Development of cellulosic secondary walls in flax fibers requires beta-galactosidase

Roach, Melissa J ; Mokshina, Natalia Y ; Badhan, Ajay ; Snegireva, Anastasiya V ; Hobson, Neil ; Deyholos, Michael K ; Gorshkova, Tatyana A

Plant physiology, July 2011, Vol.156(3), pp.1351-63 [Peer Reviewed Journal]

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32
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Sucrose synthase gene expression analysis in the fibre nettle (Urtica dioica L.) cultivar “clone 13”

Backes, Aurélie ; Behr, Marc ; Xu, Xuan ; Gatti, Edoardo ; Legay, Sylvain ; Predieri, Stefano ; Hausman, Jean-Francois ; Deyholos, Michael K ; Cai, Giampiero ; Guerriero, Gea

Industrial Crops & Products, 01 November 2018, Vol.123, pp.315-322 [Peer Reviewed Journal]

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33
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Induced Mutagenesis in Gene Leads to Stable New Flax Lines with Altered Secoisolariciresinol Diglucoside (SDG) Profiles

Fofana, Bourlaye ; Ghose, Kaushik ; Somalraju, Ashok ; Mccallum, Jason ; Main, David ; Deyholos, Michael K ; Rowland, Gordon G ; Cloutier, Sylvie

Frontiers in plant science, 2017, Vol.8, pp.1638 [Peer Reviewed Journal]

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34
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A Novel NAC-Type Transcription Factor, NAC87, from Oilseed Rape Modulates Reactive Oxygen Species Accumulation and Cell Death

Yan, Jingli ; Tong, Tiantian ; Li, Xin ; Chen, Qinqin ; Dai, Moyu ; Niu, Fangfang ; Yang, Mingfeng ; Deyholos, Michael K ; Yang, Bo ; Jiang, Yuan - Qing

Plant and Cell Physiology, 2018, Vol. 59(2), pp.290-303 [Peer Reviewed Journal]

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35
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Phylogenetic pinpointing of a paleopolyploidy event within the flax genus (Linum) using transcriptomics

Sveinsson, Saemundur ; Mcdill, Joshua ; Wong, Gane K S ; Li, Juanjuan ; Li, Xia ; Deyholos, Michael K ; Cronk, Quentin C B

Annals of botany, April 2014, Vol.113(5), pp.753-61 [Peer Reviewed Journal]

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36
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Identification and characterization of CBL and CIPK gene families in canola (Brassica napus L.)

Zhang, Hanfeng ; Yang, Bo ; Liu, Wu-Zhen ; Li, Hongwei ; Wang, Lei ; Wang, Boya ; Deng, Min ; Liang, Wanwan ; Deyholos, Michael K ; Jiang, Yuan-Qing

BMC plant biology, 07 January 2014, Vol.14, pp.8 [Peer Reviewed Journal]

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37
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Comparative proteomic analysis of NaCl stress-responsive proteins in roots

Jiang, Yuanqing ; Yang, Bo ; Harris, Neil S ; Deyholos, Michael K

Journal of Experimental Botany, 2007, 2007, Vol. 58(13), pp.3591-3607 [Peer Reviewed Journal]

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